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Transcriptome wide characterization of water deficit responsive grape mTERF transcription

Journal of Plant Biochemistry and Biotechnology. 2020; 
Behcet inal, Emre ilhan, ilker Buyuk, Serdar Altıntas¸
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Molecular Biology Tools Subcellular localization of the mTERF family was estimated by using the WoLF PSORT (http://www.genscript.com/psort/ wolf_psort.html) (Horton et al. 2007) and TargetP 1.1 (http://www.cbs.dtu.dk/services/TargetP/) online tools (Emanuelsson et al. 2007). Get A Quote

摘要

Plant mitochondrial transcription termination factor (mTERF) is a large and important family with valuable roles in organizing of organelle gene expression under the various stresses. In this study, genome wide analysis of mTERF regulatory genes was achieved and twenty-five potential mTERF genes response water deficit in grape (Vitis vinifera L.) were determined. Most of them were targeted to organelles genome especially mitochondria. It was found that Grape mTERFs were clustered into six main groups based on phylogenetic analysis. As a result of comprehensive expression analysis of these genes, using RNA-seq data in this study revealed that these genes have various expression profiles. With this study, various... More

关键词

Grape mTERF Mitochondria RNA-seq Water stress A