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Targeted Re-Sequencing Approach of Candidate Genes Implicates Rare Potentially Functional Variants in Tourette Syndrome Etiology.

Front Neurosci. 2016; 
AlexanderJohn,PotamianouHera,XingJinchuan,DengLi,KaragiannidisIordanis,TsetsosFotis,DrineasPetros,TarnokZsanett,RizzoRenata,WolanczykTomasz,FarkasLuca,NagyPeter,SzymanskaUrszula,AndroutsosChristos,TsironiVaia,KoumoulaAnastasia,BartaCsaba,,SandorPaul,BarrCathy L,TischfieldJay,PaschouPeristera,HeimanGary A,GeorgitsiMaria
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DNA Sequencing PCR products were purified using QIAquick PCR purification kit from Qiagen (QIAGEN, CA), followed by Sanger sequencing on an ABI 3730xl sequencer in Genscript (NJ, USA), using the BigDye Terminator v. Get A Quote

摘要

Although the genetic basis of Tourette Syndrome (TS) remains unclear, several candidate genes have been implicated. Using a set of 382 TS individuals of European ancestry we investigated four candidate genes for TS (, and ) in an effort to identify possibly causal variants using a targeted re-sequencing approach by next generation sequencing technology. Identification of possible disease causing variants under different modes of inheritance was performed using the algorithms implemented in VAAST. We prioritized variants using Variant ranker and validated five rare variants via Sanger sequencing in and , all of which are predicted to be deleterious. Intriguingly, one of the identified variants is in lin... More

关键词

HDC,SLITRK1,TS candidate genes,genetic susceptibility,next generation sequencing,rare variants,targeted re-sequen