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NMR characterization of the conformational fluctuations of the human lymphocyte function-associated antigen-1 I-domain.

Protein Sci.. 2014-08; 
Leung HT, Kukic P, Camilloni C, Bemporad F, De Simone A, Aprile FA, Kumita JR, Vendruscolo M. Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom.
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摘要

Lymphocyte function-associated antigen-1 (LFA-1) is an integrin protein that transmits information across the plasma membrane through the so-called inside-out and outside-in signaling mechanisms. To investigate these mechanisms, we carried out an NMR analysis of the dynamics of the LFA-1 I-domain, which has enabled us to characterize the motions of this domain on a broad range of timescales. We studied first the internal motions on the nanosecond timescale by spin relaxation measurements and model-free analysis. We then extended this analysis to the millisecond timescale motions by measuring 15 N-1 H residual dipolar couplings of the backbone amide groups. We analyzed these results in the context of the three m... More

关键词

NMR spectroscopy; allostery; protein dynamics; signaling mechanism