| Products/Services Used | Details | Operation |
|---|---|---|
| Custom Vector Construction | The NCBI database was used for searching OsMYB1 nucleotide and protein sequences and CLUSTALW for sequence alignment. SMART (http://smart.embl-heidelberg.de/) online tool was used to predict conserve DNA binding domain. Secondary structure was predicted by PSIPRED Protein Structure Prediction server (http://bioinf.cs.ucl.ac.uk/psipred/). Nuclear localization signals (NLS) prediction was carried out using online tool WoLF pSORT (http://www.genscript.com/wolf-psort.html). Primary sequence was analyzed by DISOPRED (http://bioinf.cs.ucl.ac.uk/psipred/?disopred=1) to measure the degree of intrinsic disorder. Protein-protein interaction network was constructed by STRING (http://string-db.org/newstring_cgi/show_input_page.pl?UserId=TwZ3I284aTRf&sessionId=AzWVpTDVECpt). The interactions comprise of physical and functional combinations. | Get A Quote |
The NCBI database was used for searching OsMYB1 nucleotide and protein sequences and CLUSTALW for sequence alignment. SMART (http://smart.embl-heidelberg.de/) online tool was used to predict conserve DNA binding domain. Secondary structure was predicted by PSIPRED Protein Structure Prediction server (http://bioinf.cs.ucl.ac.uk/psipred/). Nuclear localization signals (NLS) prediction was carried out using online tool WoLF pSORT (http://www.genscript.com/wolf-psort.html). Primary sequence was analyzed by DISOPRED (http://bioinf.cs.ucl.ac.uk/psipred/?disopred=1) to measure the degree of intrinsic disorder. Protein-protein interaction network was constructed by STRING (http://string-db.org/newstring_cgi/show_input... More
